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Intron Name: Anas_platyrhynchos_platyrhynchos_23_30659_31807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30659 - 31807

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCTC

5'SS Class:

major

3'SS Sequence:

TCATGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CCTGCTGTAATT

Flanking Amino Acid:

HGLVTLGWIHTHPTQTAFLS

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

74.3

36.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.1

0.59

72.7

42.1

Minor 5ss

35.8

-1.6

3.1

49.2

40.2

Minor BPS

48.7

-0

2.1

66.31

45.7

Associated Gene:

Gene:

STAMBP

Ensembl Gene ID:

ENSAPLG00000005548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017577

19098 - 34623

15526

ENSAPLT00000005765

18031 - 34623

16593