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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3114718_3117875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3114718 - 3117875

Intron Length:

3158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGGT

5'SS Class:

major

3'SS Sequence:

CCTCCCACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

CTCCCTCCCACT

Flanking Amino Acid:

YWSIHLGLTEGEEFYEASPY

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

43.2

Major BPS

1.2

61.8

35.9

Major PPT

72.4

0.51

0.8

62.4

33.2

Minor 5ss

29.9

-2.3

3.8

46.9

48.5

Minor BPS

40.9

-0.6

2.1

57.83

45.1

Associated Gene:

Gene:

GFRA2

Ensembl Gene ID:

ENSAPLG00000012246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026330

3114402 - 3131816

17415

ENSAPLT00000012767

3114402 - 3130504

16103