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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3117960_3121228_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3117960 - 3121228

Intron Length:

3269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTCCCCATATCT

Flanking Amino Acid:

DIFRLASIFSGMDPATNSKS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

57.6

0.17

1.1

53.3

41.5

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

56.4

0.28

1.9

78.59

43.2

Associated Gene:

Gene:

GFRA2

Ensembl Gene ID:

ENSAPLG00000012246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012767

3114402 - 3130504

16103

ENSAPLT00000026330

3114402 - 3131816

17415