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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3129056_3129151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3129056 - 3129151

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCGGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CAGCCCTTCATC

Flanking Amino Acid:

ACLGSYAGLIGFDMTPNYVD

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

0.62

1.1

77.2

Major PPT

63.1

0.3

56.3

38.8

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

49.9

-0

1.8

56.58

42.3

Associated Gene:

Gene:

GFRA2

Ensembl Gene ID:

ENSAPLG00000012246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026330

3114402 - 3131816

17415

ENSAPLT00000018084

3114402 - 3130326

15925

ENSAPLT00000012767

3114402 - 3130504

16103