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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3129293_3129388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3129293 - 3129388

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

CCTGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

CCCCACGTAAAT

Flanking Amino Acid:

LRDFTENPCLRNAIQAFGNG

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.7

0.25

1.4

46.7

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

0.41

0.8

57.9

33.2

Minor 5ss

-1.9

3.4

46.5

42.3

Minor BPS

42.2

-0.5

2.2

55.16

46.3

Associated Gene:

Gene:

GFRA2

Ensembl Gene ID:

ENSAPLG00000012246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012767

3114402 - 3130504

16103

ENSAPLT00000026330

3114402 - 3131816

17415

ENSAPLT00000018084

3114402 - 3130326

15925