Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_3303164_3303285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3303164 - 3303285

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

CTGTGGTTAATT

Flanking Amino Acid:

QKFEKNFIAQGPYENRTVYE

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

35.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

78.5

0.64

0.8

74.2

36.2

Minor 5ss

37.6

-1.4

44.8

42.9

Minor BPS

48.8

-0

2.4

70.86

46.8

Associated Gene:

Gene:

ATP6V1B2

Ensembl Gene ID:

ENSAPLG00000016273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016989

3303021 - 3308255

5235