Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_3303416_3303886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3303416 - 3303886

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

AAAGCACTAATG

Flanking Amino Acid:

KDHADVSNQLYACYAIGKDV

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

77.7

31.7

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

90.3

0.91

0.6

88.3

21.3

Minor 5ss

41.3

-1

2.5

47.2

43.7

Minor BPS

43.4

-0.6

1.9

46.13

Associated Gene:

Gene:

ATP6V1B2

Ensembl Gene ID:

ENSAPLG00000016273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016989

3303021 - 3308255

5235