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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3315271_3315408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3315271 - 3315408

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGGATA

5'SS Class:

major

3'SS Sequence:

CTTTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TGCTGTGTGACG

Flanking Amino Acid:

ALGGLALGVLIGAPFGSVMY

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.4

38.8

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

86.7

0.83

0.7

24.1

Minor 5ss

37.1

-1.5

3.3

45.1

43.8

Minor BPS

42.7

-0.7

2.4

50.34

44.5

Associated Gene:

Gene:

SLC18A1

Ensembl Gene ID:

ENSAPLG00000002293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002318

3313289 - 3319564

6276