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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3316674_3316776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3316674 - 3316776

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCAGAG

U12 Branch Point Sequence:

TTCTCCCCACCA

Flanking Amino Acid:

LRDPYILVAAGALCFSNMGV

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

37.1

-0.8

1.4

26.1

36.2

Major PPT

74.4

0.55

0.8

67.4

33.9

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

48.6

-0.1

2.1

68.3

43.9

Associated Gene:

Gene:

SLC18A1

Ensembl Gene ID:

ENSAPLG00000002293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002318

3313289 - 3319564

6276