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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3318372_3318579_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3318372 - 3318579

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTCTTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

TTCTTCTCCAAG

Flanking Amino Acid:

MAVVGISLLCVPLAKSIYGL

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

65.2

40.8

Major BPS

69.9

0.5

31.5

Major PPT

0.58

75.4

33.4

Minor 5ss

32.6

-2

2.7

37.6

Minor BPS

45.7

-0.4

2.1

56.14

45.3

Associated Gene:

Gene:

SLC18A1

Ensembl Gene ID:

ENSAPLG00000002293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002318

3313289 - 3319564

6276