Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_3325891_3326061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3325891 - 3326061

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATGAT

U12 Branch Point Sequence:

GGCACGGGAATG

Flanking Amino Acid:

RCLHHLVLNVPGADLCQYNR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

59.1

0.23

1.3

51.7

43.9

Major PPT

84.8

0.78

0.8

79.9

32.1

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

33.8

-1.3

2.4

34.2

40.1

Associated Gene:

Gene:

TTI2

Ensembl Gene ID:

ENSAPLG00000002866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002900

3323376 - 3327134

3759