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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3328264_3328345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328264 - 3328345

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTACACCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

GGTTTTTCAGCC

Flanking Amino Acid:

VLPCQHAFHRKCLVKWLEVR

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

70.3

0.46

0.9

62.5

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

48.6

-0.1

1.7

59.81

39.3

Associated Gene:

Gene:

RNF122

Ensembl Gene ID:

ENSAPLG00000003031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003080

3328149 - 3333235

5087