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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3329120_3329942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3329120 - 3329942

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TAAAGCTCACGG

Flanking Amino Acid:

LSLIFCCYFISKLRHQAQSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

59.7

46.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.8

0.6

0.8

68.1

32.1

Minor 5ss

31.8

-2.1

38.6

46.5

Minor BPS

-1.2

2.2

38.34

Associated Gene:

Gene:

RNF122

Ensembl Gene ID:

ENSAPLG00000003031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003080

3328149 - 3333235

5087