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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3399531_3421789_F

Intron Information:

Intron Rank:

125964

Intron Class:

major

Intron Phase:

Intron Coordinates:

3399531 - 3421789

Intron Length:

22259

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTACCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.86

81.5

35.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.1

0.66

0.8

70.6

35.8

Minor 5ss

25.8

-2.8

3.6

33.5

35.6

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020652

3398772 - 3426873

28102