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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3421888_3425389_F

Intron Information:

Intron Rank:

125965

Intron Class:

major

Intron Phase:

Intron Coordinates:

3421888 - 3425389

Intron Length:

3502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTCTTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.6

46.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.9

0.76

0.9

83.4

Minor 5ss

41.9

-0.9

3.2

55.4

48.8

Minor BPS

0.2

1.9

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020652

3398772 - 3426873

28102

ENSAPLT00000034697

3418634 - 3426873

8240