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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3514848_3519088_F

Intron Information:

Intron Rank:

139278

Intron Class:

major

Intron Phase:

Intron Coordinates:

3514848 - 3519088

Intron Length:

4241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

56.8

42.6

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

-3.1

3.3

28.9

43.6

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047454

3513857 - 3519536

5680