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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3568852_3571535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3568852 - 3571535

Intron Length:

2684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TATTCCTCACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

72.5

0.56

1.2

39.9

Major PPT

85.9

0.81

0.7

81.1

30.2

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

62.7

0.48

1.8

81.52

40.2

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014468

3568680 - 3710079

141400