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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3582317_3646391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3582317 - 3646391

Intron Length:

64075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAAAAT

U12 Branch Point Sequence:

TTTTCCTTTCCT

Flanking Amino Acid:

GLCSWAAALRGNDNSEALPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

-0.1

1.2

53.6

38.7

Major PPT

83.8

0.76

0.7

80.7

24.6

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060