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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3653479_3657648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3653479 - 3657648

Intron Length:

4170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

AAACTCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTATATTGAATT

Flanking Amino Acid:

KSRKASVRIAYLRKNFEQDP

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

70.4

0.46

0.9

38.4

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

61.1

0.43

1.6

78.83

37.2

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060

ENSAPLT00000014468

3568680 - 3710079

141400