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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3657753_3678917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3657753 - 3678917

Intron Length:

21165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CACCCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TCTTCTCCACCC

Flanking Amino Acid:

RPPEGVPAAEVEWLKNEEPI

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

71.5

0.48

0.8

61.4

34.6

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

46.4

-0.2

2.1

62.86

42.9

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014468

3568680 - 3710079

141400

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060