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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3679099_3679943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3679099 - 3679943

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTGGTGAA

5'SS Class:

major

3'SS Sequence:

TTGTGCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CAACCACTAACA

Flanking Amino Acid:

RSMSATVVVYVNGGWSSWTE

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

62.4

37.9

Major BPS

64.5

0.36

65.2

28.2

Major PPT

82.9

0.74

0.9

77.1

37.1

Minor 5ss

27.1

-2.6

3.1

28.8

37.6

Minor BPS

47.1

-0.2

1.9

57.58

40.7

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060

ENSAPLT00000014468

3568680 - 3710079

141400