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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3681201_3688785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3681201 - 3688785

Intron Length:

7585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCGGAA

U12 Branch Point Sequence:

TGACTCGGAACC

Flanking Amino Acid:

ENCTEGLCIQDIENASDIAL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.3

32.8

Major BPS

47.9

-0.1

1.3

46.7

38.9

Major PPT

0.92

0.6

Minor 5ss

33.5

-1.9

3.1

44.4

43.7

Minor BPS

45.9

-0.3

2.1

58.34

39.9

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023983

3581943 - 3712002

130060

ENSAPLT00000014468

3568680 - 3710079

141400