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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3688972_3691861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3688972 - 3691861

Intron Length:

2890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTGCCTGATCC

Flanking Amino Acid:

QTFNFKTVRQGNSLLLNSSM

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

86.4

29.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

76.5

0.6

0.9

70.5

39.9

Minor 5ss

-1.7

3.3

46.3

Minor BPS

49.7

-0

1.9

61.44

43.8

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060

ENSAPLT00000014468

3568680 - 3710079

141400