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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3702840_3704184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3702840 - 3704184

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AACACTTTAAAA

Flanking Amino Acid:

CMDNTPCSFQEVVLDERLQG

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.61

0.9

70.1

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

57.6

0.23

1.4

61.09

38.5

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014468

3568680 - 3710079

141400

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060