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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3704335_3706565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3704335 - 3706565

Intron Length:

2231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTGCT

5'SS Class:

major

3'SS Sequence:

CTTTCTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGGGAT

U12 Branch Point Sequence:

CTTTCTGTCACA

Flanking Amino Acid:

WRIKPFTACQEVPFSRVWCS

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

71.8

Major BPS

39.5

-0.6

1.5

28.5

45.1

Major PPT

80.6

0.69

0.8

75.4

33.1

Minor 5ss

34.3

-1.8

3.4

45.4

Minor BPS

49.5

-0

2.4

70.26

42.8

Associated Gene:

Gene:

UNC5D

Ensembl Gene ID:

ENSAPLG00000013846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036432

3581943 - 3712002

130060

ENSAPLT00000023983

3581943 - 3712002

130060

ENSAPLT00000014468

3568680 - 3710079

141400