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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3805209_3810155_F

Intron Information:

Intron Rank:

141448

Intron Class:

major

Intron Phase:

Intron Coordinates:

3805209 - 3810155

Intron Length:

4947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

ACTTTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTGTACTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

82.2

0.72

0.7

77.5

30.4

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

60.1

0.4

1.8

79.69

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026812

3804357 - 3822769

18413