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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3840953_3841540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3840953 - 3841540

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CATGTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

ATCTCCTTAATG

Flanking Amino Acid:

SAQTSMGCVLVILVFLLNIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

0.61

72.9

41.9

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

77.7

0.73

1.2

73.58

39.3

Associated Gene:

Gene:

KCNU1

Ensembl Gene ID:

ENSAPLG00000014841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015471

3840746 - 3889681

48936