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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3843611_3844401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3843611 - 3844401

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TATTCATCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGCTCTTTGATG

Flanking Amino Acid:

AFFLFYFGLRFVAADDKLRF

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

41.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

77.7

0.62

0.8

75.2

34.4

Minor 5ss

32.6

-2

3.1

33.4

41.6

Minor BPS

63.7

0.29

1.3

62.54

40.2

Associated Gene:

Gene:

KCNU1

Ensembl Gene ID:

ENSAPLG00000014841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015471

3840746 - 3889681

48936