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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3846300_3846742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3846300 - 3846742

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTGGTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

AAGATTGTATTT

Flanking Amino Acid:

FIIFFIIGGLVLFANIIPEV

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

62.7

0.32

1.4

63.4

Major PPT

67.9

0.4

0.9

65.1

41.2

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

39.9

-0.6

37.9

Associated Gene:

Gene:

KCNU1

Ensembl Gene ID:

ENSAPLG00000014841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015471

3840746 - 3889681

48936