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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3851849_3854046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3851849 - 3854046

Intron Length:

2198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTGATGCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATGCTTGATG

Flanking Amino Acid:

SLFIGKENTETKRKYLKDKT

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

73.3

37.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

73.3

0.52

0.9

70.3

41.2

Minor 5ss

40.6

-1.1

2.7

45.4

Minor BPS

59.8

0.16

1.9

66.98

41.2

Associated Gene:

Gene:

KCNU1

Ensembl Gene ID:

ENSAPLG00000014841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015471

3840746 - 3889681

48936