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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3854160_3854253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3854160 - 3854253

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTGGT

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAGAT

U12 Branch Point Sequence:

GATACTGTGACT

Flanking Amino Acid:

FADMTFIEVCRLCFVKLNLV

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

69.2

41.7

Major BPS

57.5

0.19

52.7

34.2

Major PPT

87.8

0.85

0.7

80.6

31.5

Minor 5ss

-1

3.2

46.6

Minor BPS

49.2

0.02

2.1

69.4

41.5

Associated Gene:

Gene:

KCNU1

Ensembl Gene ID:

ENSAPLG00000014841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015471

3840746 - 3889681

48936