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Intron Name: Anas_platyrhynchos_platyrhynchos_23_385640_386421_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

385640 - 386421

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGAG

5'SS Class:

major

3'SS Sequence:

AACCTGGATTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTAACCTGGATT

Flanking Amino Acid:

QTESVASNRTDSLTGEDSLL

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

64.4

41.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

59.5

0.21

1.1

54.6

44.2

Minor 5ss

-2.6

3.1

31.3

Minor BPS

61.5

0.44

1.5

77.64

38.6

Associated Gene:

Gene:

AAK1

Ensembl Gene ID:

ENSAPLG00000002094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031090

316657 - 402033

85377

ENSAPLT00000024110

316657 - 393403

76747

ENSAPLT00000002277

316657 - 387455

70799