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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3888434_3889512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3888434 - 3889512

Intron Length:

1079

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

AGTGCTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GCAGCCTGAATC

Flanking Amino Acid:

LMKEPNPYKNRFVIARPASD

Intron Amino Acid Position:

970

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

84.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

77.6

0.62

0.9

73.6

41.2

Minor 5ss

24.7

-2.9

3.6

32.7

42.2

Minor BPS

52.4

0.06

1.6

56.77

41.8

Associated Gene:

Gene:

KCNU1

Ensembl Gene ID:

ENSAPLG00000014841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015471

3840746 - 3889681

48936