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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3914140_3959785_F

Intron Information:

Intron Rank:

132818

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3914140 - 3959785

Intron Length:

45646

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

GGG|GTGGTGTGC

5'SS Class:

weak_major

3'SS Sequence:

TGTGAGCTACTGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATAGAT

U12 Branch Point Sequence:

GCTGCATAGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.1

44.6

40.1

Major BPS

0.23

1.1

56.4

39.5

Major PPT

35.3

-0.8

3.1

40.8

43.7

Minor 5ss

29.9

-2.3

3.4

42.8

Minor BPS

41.8

-0.7

43.65

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047127

3913784 - 3961013

47230