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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3937_4056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3937 - 4056

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTGCTTTCCACC

Flanking Amino Acid:

MVQCANSQSKIHQTYELMQH

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

76.2

0.59

0.9

67.5

37.8

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

46.1

-0.3

1.9

59.11

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035409

859 - 6674

5816