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Intron Name: Anas_platyrhynchos_platyrhynchos_23_39551_39632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39551 - 39632

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGGGGA

5'SS Class:

major

3'SS Sequence:

CCGTCTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAA

U12 Branch Point Sequence:

CTGCACTGAAAC

Flanking Amino Acid:

TERGYSFVTTAEREIVRDIK

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

Major BPS

65.6

0.39

0.9

67.3

29.6

Major PPT

78.6

0.64

0.8

72.5

32.2

Minor 5ss

35.2

-1.7

3.5

46.1

49.1

Minor BPS

46.9

-0.2

1.8

55.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021805

38332 - 40637

2306