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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4089027_4089495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4089027 - 4089495

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCGGG

5'SS Class:

major

3'SS Sequence:

TCTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCGAT

U12 Branch Point Sequence:

GCTTGCCGATGT

Flanking Amino Acid:

TTMAPGLIIQAVRVTKPNIP

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

59.9

45.1

Major BPS

53.5

0.09

1.4

52.1

45.2

Major PPT

0.86

0.7

80.3

31.7

Minor 5ss

35.8

-1.6

3.3

47.4

Minor BPS

36.3

-0.9

2.3

Associated Gene:

Gene:

ERLIN2

Ensembl Gene ID:

ENSAPLG00000014963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015652

4085040 - 4095682

10643

ENSAPLT00000040163

4084498 - 4095682

11185