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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4092550_4093600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4092550 - 4093600

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

TGAATCTGAGCT

Flanking Amino Acid:

TAMKVAEANKMKLTPEYLQL

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

0.2

1.3

67.7

36.5

Major PPT

84.3

0.77

0.9

80.6

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

49.2

0.02

1.7

67.55

42.5

Associated Gene:

Gene:

ERLIN2

Ensembl Gene ID:

ENSAPLG00000014963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040163

4084498 - 4095682

11185

ENSAPLT00000015652

4085040 - 4095682

10643