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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4099219_4099491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4099219 - 4099491

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCGCAC

U12 Branch Point Sequence:

GCAGCCCAAAGC

Flanking Amino Acid:

LQKNNVNKLIAVPNLFMLET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

72.7

39.4

Major BPS

46.9

-0.1

1.5

41.8

Major PPT

82.1

0.72

0.8

78.1

30.8

Minor 5ss

-0.3

2.8

66.9

43.9

Minor BPS

39.2

-0.8

2.1

44.12

43.6

Associated Gene:

Gene:

PLPBP

Ensembl Gene ID:

ENSAPLG00000015393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016052

4098156 - 4099679

1524