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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4117538_4117621_F

Intron Information:

Intron Rank:

128551

Intron Class:

major

Intron Phase:

Intron Coordinates:

4117538 - 4117621

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

GTGTCCCCAGCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.9

38.9

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

36.9

-1.5

3.3

42.2

Minor BPS

44.8

-0.5

2.1

53.62

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048508

4107016 - 4117863

10848