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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4127048_4127286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4127048 - 4127286

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTGG

5'SS Class:

major

3'SS Sequence:

TGTCCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAG

U12 Branch Point Sequence:

CTGTTTCTAGCT

Flanking Amino Acid:

LADLVKTHLSSFHLFRRTGD

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.3

45.8

Major BPS

49.9

-0

1.7

58.5

47.9

Major PPT

82.2

0.72

0.8

73.3

37.1

Minor 5ss

41.7

-0.9

3.2

55.9

48.3

Minor BPS

48.1

-0

1.9

67.53

43.9

Associated Gene:

Gene:

BRF2

Ensembl Gene ID:

ENSAPLG00000020942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030298

4124797 - 4128959

4163