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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4128009_4128607_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4128009 - 4128607

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGCCC

5'SS Class:

major

3'SS Sequence:

TACTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAACAT

U12 Branch Point Sequence:

CCAGCCCTAACA

Flanking Amino Acid:

TTYTDEQHLREVAYSQSTGQ

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

57.6

41.5

Major BPS

58.4

0.21

1.2

65.6

39.7

Major PPT

86.3

0.82

0.7

84.3

30.1

Minor 5ss

25.5

-2.8

3.2

33.6

41.9

Minor BPS

52.1

0.06

1.9

60.56

45.2

Associated Gene:

Gene:

BRF2

Ensembl Gene ID:

ENSAPLG00000020942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030298

4124797 - 4128959

4163