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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4133435_4135272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4133435 - 4135272

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

ATGTCTGTAATA

Flanking Amino Acid:

NEKLIEMNVKKYDPSDPAYA

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

70.1

0.5

70.3

31.9

Major PPT

77.8

0.63

79.1

26.8

Minor 5ss

37.8

-1.4

3.1

48.3

47.5

Minor BPS

0.21

68.96

38.3

Associated Gene:

Gene:

RAB11FIP1

Ensembl Gene ID:

ENSAPLG00000008753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020385

4133216 - 4144395

11180

ENSAPLT00000009105

4133216 - 4144395

11180