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Intron Name: Anas_platyrhynchos_platyrhynchos_23_41355_41473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41355 - 41473

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCTCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGCCAT

U12 Branch Point Sequence:

GCCGCGCCATCG

Flanking Amino Acid:

WQKVAAGAEEAPGSGNLLQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

42.8

-0.4

1.5

46.1

46.9

Major PPT

64.2

0.32

0.9

56.8

33.4

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

29.7

-1.6

2.2

28.33

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040511

40973 - 42677

1705