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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4136419_4138896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4136419 - 4138896

Intron Length:

2478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACGTCTG

5'SS Class:

major

3'SS Sequence:

CCTCTCTCTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CTTCTCTGAGCC

Flanking Amino Acid:

LLVALFTATRILHSPALPFA

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.6

44.8

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

69.8

0.45

67.4

32.9

Minor 5ss

38.5

-1.3

3.2

49.8

40.7

Minor BPS

50.8

1.7

64.43

Associated Gene:

Gene:

RAB11FIP1

Ensembl Gene ID:

ENSAPLG00000008753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047466

4135365 - 4144395

9031