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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4136419_4139371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4136419 - 4139371

Intron Length:

2953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCGT

5'SS Class:

major

3'SS Sequence:

CCTCTCTCTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CTTCTCTGAGCC

Flanking Amino Acid:

AAAKTKAVKPSPSQPCSAFR

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.3

72.7

44.5

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

69.8

0.45

67.4

32.9

Minor 5ss

31.4

-2.1

2.9

42.4

44.2

Minor BPS

50.8

1.7

64.43

Associated Gene:

Gene:

RAB11FIP1

Ensembl Gene ID:

ENSAPLG00000008753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020385

4133216 - 4144395

11180

ENSAPLT00000035214

4134376 - 4144395

10020