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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4146292_4147339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4146292 - 4147339

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CATGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

CCCCCCCCATGT

Flanking Amino Acid:

VFTLTAIAVDRYYATVHPLK

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

69.5

0.44

0.9

62.3

34.3

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

35.7

-1

2.1

45.76

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009059

4145670 - 4147746

2077