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Intron Name: Anas_platyrhynchos_platyrhynchos_23_415533_416354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

415533 - 416354

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTGATTCTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTCTGTTTAATC

Flanking Amino Acid:

FGPDFITITKESEDLDWNLL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

70.4

0.46

0.9

64.9

36.4

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

64.8

0.44

1.7

73.34

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001963

407398 - 422137

14740

ENSAPLT00000041079

406496 - 422137

15642

ENSAPLT00000031568

406639 - 422137

15499