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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4180226_4180334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4180226 - 4180334

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

TGGAGCTGAGGC

Flanking Amino Acid:

FKPTNHAYIQSLLQLYKPHQ

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

69.3

0.43

0.9

62.1

34.8

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

37.8

-0.9

2.1

44.69

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036949

4180073 - 4182526

2454

ENSAPLT00000023058

4180073 - 4183169

3097