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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4181298_4182803_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4181298 - 4182803

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCGCCGCT

5'SS Class:

weak_major

3'SS Sequence:

ATCCCCATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TGTCCCTGAGCA

Flanking Amino Acid:

AAIAAAAAAMHRAVPWYLCA

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.3

55.2

40.6

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

68.4

0.41

0.9

58.7

36.3

Minor 5ss

28.4

-2.5

4.4

44.8

45.2

Minor BPS

58.1

0.25

1.7

71.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023058

4180073 - 4183169

3097